Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CHTOPQ9Y3Y2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CHTOPQ9Y3Y2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CHTOPQ9Y3Y2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.39
CHTOPQ9Y3Y2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.65□□□□□ -0.39
CHTOPQ9Y3Y2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 TNRC18P2-201ENST00000417666 2714 ntBASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 NTF6G-201ENST00000591094 616 ntBASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 AC005252.3-201ENST00000623855 2258 ntBASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CICP23-201ENST00000605013 2741 ntBASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHTOPQ9Y3Y2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 AC093010.1-201ENST00000473625 1624 ntBASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 AC007322.1-201ENST00000426983 750 ntBASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 POU5F1P3-201ENST00000428824 1078 ntBASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 AL121829.2-201ENST00000620908 328 ntBASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 AC231657.2-201ENST00000624556 255 ntBASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms