Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MACF1Q9UPN3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
MACF1Q9UPN3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FBXW4P1-201ENST00000426721 2239 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AC079336.7-201ENST00000623428 1078 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FUT8-AS1-201ENST00000621019 1521 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FEM1AP4-201ENST00000443167 1987 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TEX28P1-201ENST00000613479 1221 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TEX28P2-201ENST00000617764 1221 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PRKXP1-201ENST00000561423 1122 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 MIR3907-201ENST00000579424 151 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 RN7SL596P-201ENST00000582123 288 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AC020931.1-201ENST00000589622 1346 ntBASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MACF1Q9UPN3 AC097637.2-201ENST00000624096 1997 ntBASIC7.07□□□□□ -1.28
MACF1Q9UPN3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
MACF1Q9UPN3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MACF1Q9UPN3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms