Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 YBX2P1-201ENST00000394192 760 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 IGLL3P-201ENST00000412472 434 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 VN2R19P-201ENST00000442399 1052 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 HCG4B-203ENST00000450128 991 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 AC040169.1-201ENST00000565382 521 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 MIR4751-201ENST00000578027 74 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 AC055717.3-201ENST00000622967 595 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 NOC2LP1-202ENST00000452600 2235 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 LYSMD4-203ENST00000378904 2122 ntBASIC19.76■□□□□ 0.75
COL20A1Q9P218 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL20A1Q9P218 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 MIR1233-2-201ENST00000408138 82 ntBASIC19.75■□□□□ 0.75
COL20A1Q9P218 MIR1233-1-201ENST00000408722 82 ntBASIC19.75■□□□□ 0.75
COL20A1Q9P218 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 SLC25A6P5-201ENST00000435663 894 ntBASIC19.75■□□□□ 0.75
COL20A1Q9P218 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 AC018845.2-201ENST00000568326 409 ntBASIC19.75■□□□□ 0.75
COL20A1Q9P218 AC010327.4-202ENST00000591484 748 ntBASIC19.75■□□□□ 0.75
COL20A1Q9P218 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL20A1Q9P218 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL20A1Q9P218 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 AP002414.1-201ENST00000391405 1147 ntBASIC19.74■□□□□ 0.75
COL20A1Q9P218 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 AC092865.6-201ENST00000642101 219 ntBASIC19.74■□□□□ 0.75
COL20A1Q9P218 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL20A1Q9P218 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.74■□□□□ 0.75
COL20A1Q9P218 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms