Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.54□□□□□ -0.08
CALYQ9NYX4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 SIRPAP1-201ENST00000448467 1770 ntBASIC14.54□□□□□ -0.08
CALYQ9NYX4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CALYQ9NYX4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CALYQ9NYX4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 LYSMD4-203ENST00000378904 2122 ntBASIC14.53□□□□□ -0.08
CALYQ9NYX4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 FAM220CP-201ENST00000395253 831 ntBASIC14.53□□□□□ -0.08
CALYQ9NYX4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 Z69720.1-201ENST00000601483 472 ntBASIC14.53□□□□□ -0.08
CALYQ9NYX4 AL139327.4-201ENST00000612362 153 ntBASIC14.53□□□□□ -0.08
CALYQ9NYX4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 AL358472.4-201ENST00000633140 710 ntBASIC14.53□□□□□ -0.08
CALYQ9NYX4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CALYQ9NYX4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CALYQ9NYX4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CALYQ9NYX4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.52□□□□□ -0.08
CALYQ9NYX4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CALYQ9NYX4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CALYQ9NYX4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 AC233702.3-201ENST00000578656 1387 ntBASIC14.52□□□□□ -0.08
CALYQ9NYX4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CALYQ9NYX4 AC108860.2-201ENST00000562760 2183 ntBASIC14.52□□□□□ -0.08
CALYQ9NYX4 ARMC10P1-201ENST00000313754 855 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CALYQ9NYX4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CALYQ9NYX4 MYCLP1-201ENST00000372451 1075 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CALYQ9NYX4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.52□□□□□ -0.09
CALYQ9NYX4 DRAXINP1-201ENST00000437611 948 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 AC091607.1-201ENST00000490318 1060 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 AC122714.2-201ENST00000502787 707 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.52□□□□□ -0.09
CALYQ9NYX4 IGHV3-52-201ENST00000519770 353 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 AC009533.2-201ENST00000543664 586 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.52□□□□□ -0.09
CALYQ9NYX4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.52□□□□□ -0.09
CALYQ9NYX4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CALYQ9NYX4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CALYQ9NYX4 AP002414.4-201ENST00000589764 1148 ntBASIC14.52□□□□□ -0.09
CALYQ9NYX4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms