Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 GUSBP12-201ENST00000513727 720 ntBASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 IGHV3-52-201ENST00000519770 353 ntBASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 VENTXP5-201ENST00000523979 775 ntBASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NSMCE4AQ9NXX6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE4AQ9NXX6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 AC022211.2-201ENST00000585075 2527 ntBASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 KRT18P57-201ENST00000443599 1254 ntBASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 LINC01238-205ENST00000567549 1107 ntBASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 AC006011.2-201ENST00000621313 1158 ntBASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
NSMCE4AQ9NXX6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms