Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 RARRES2P10-201ENST00000564312 460 ntBASIC17.04■□□□□ 0.32
NDE1Q9NXR1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 AC073195.1-201ENST00000607241 877 ntBASIC17.04■□□□□ 0.32
NDE1Q9NXR1 DGCR10-201ENST00000609839 495 ntBASIC17.04■□□□□ 0.32
NDE1Q9NXR1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.04■□□□□ 0.32
NDE1Q9NXR1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 AC104390.1-201ENST00000555663 520 ntBASIC17.03■□□□□ 0.32
NDE1Q9NXR1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NDE1Q9NXR1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 MFAP1P1-201ENST00000442257 1255 ntBASIC17.02■□□□□ 0.32
NDE1Q9NXR1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NDE1Q9NXR1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDE1Q9NXR1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms