Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 DDX43P3-201ENST00000441064 443 ntBASIC18.53■□□□□ 0.56
TLR9Q9NR96 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 HLA-J-202ENST00000469281 1241 ntBASIC18.53■□□□□ 0.56
TLR9Q9NR96 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR9Q9NR96 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.53■□□□□ 0.56
TLR9Q9NR96 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 AC009949.1-201ENST00000623048 1830 ntBASIC18.52■□□□□ 0.56
TLR9Q9NR96 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 AC004835.2-201ENST00000603762 682 ntBASIC18.52■□□□□ 0.56
TLR9Q9NR96 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TLR9Q9NR96 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR9Q9NR96 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TLR9Q9NR96 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TLR9Q9NR96 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TLR9Q9NR96 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TLR9Q9NR96 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TLR9Q9NR96 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TLR9Q9NR96 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AL139400.1-201ENST00000366220 510 ntBASIC18.51■□□□□ 0.55
TLR9Q9NR96 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AC004449.1-201ENST00000564240 433 ntBASIC18.51■□□□□ 0.55
TLR9Q9NR96 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AL513210.1-201ENST00000629608 234 ntBASIC18.51■□□□□ 0.55
TLR9Q9NR96 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 AC100803.2-201ENST00000562459 1963 ntBASIC18.51■□□□□ 0.55
TLR9Q9NR96 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.51■□□□□ 0.55
TLR9Q9NR96 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 PI4KAP1-204ENST00000612579 1703 ntBASIC18.51■□□□□ 0.55
TLR9Q9NR96 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms