Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 IGHV3-52-201ENST00000519770 353 ntBASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 MTDHP4-201ENST00000600287 670 ntBASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 AL049840.3-201ENST00000602669 611 ntBASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAT1LQ9HCJ6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 RNA5SP419-201ENST00000515908 135 ntBASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 AP001005.1-201ENST00000571755 1248 ntBASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAT1LQ9HCJ6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.33■□□□□ 0.84
VAT1LQ9HCJ6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.33■□□□□ 0.84
VAT1LQ9HCJ6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.33■□□□□ 0.84
VAT1LQ9HCJ6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAT1LQ9HCJ6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAT1LQ9HCJ6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 AC018712.1-201ENST00000455767 687 ntBASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 AL139288.1-201ENST00000623748 933 ntBASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAT1LQ9HCJ6 PKD1P1-201ENST00000458669 6805 ntBASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 AC148477.5-201ENST00000625164 1645 ntBASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 AL355312.1-201ENST00000407115 2176 ntBASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAT1LQ9HCJ6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms