Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.24□□□□□ -0.13
NKX6-2Q9C056 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 AC005915.1-201ENST00000624912 2018 ntBASIC14.24□□□□□ -0.13
NKX6-2Q9C056 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 MIR638-201ENST00000385237 100 ntBASIC14.24□□□□□ -0.13
NKX6-2Q9C056 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-2Q9C056 KRT8P3-201ENST00000519669 1449 ntBASIC14.24□□□□□ -0.13
NKX6-2Q9C056 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 CICP4-201ENST00000447359 2812 ntBASIC14.23□□□□□ -0.13
NKX6-2Q9C056 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms