Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXP3Q9BZS1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 AL645929.1-201ENST00000420084 975 ntBASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 AC005104.2-201ENST00000427818 678 ntBASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 AC092119.3-201ENST00000612618 583 ntBASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXP3Q9BZS1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 AC034232.1-201ENST00000506026 1064 ntBASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 KRT8P47-201ENST00000604727 1398 ntBASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 BX276092.7-203ENST00000637198 1536 ntBASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXP3Q9BZS1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
FOXP3Q9BZS1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXP3Q9BZS1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms