Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 FAM220CP-201ENST00000395253 831 ntBASIC21.27■■□□□ 1
RPAP1Q9BWH6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 AL591424.1-201ENST00000442569 1213 ntBASIC21.27■■□□□ 1
RPAP1Q9BWH6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 AC107918.4-202ENST00000641623 219 ntBASIC21.27■■□□□ 1
RPAP1Q9BWH6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RPAP1Q9BWH6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPAP1Q9BWH6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RPAP1Q9BWH6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RPAP1Q9BWH6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RPAP1Q9BWH6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AC140113.2-201ENST00000604370 208 ntBASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 Z83851.2-201ENST00000609564 659 ntBASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AC027601.4-201ENST00000611259 610 ntBASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AP000867.4-201ENST00000641616 219 ntBASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 LINC00304-203ENST00000565008 1864 ntBASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AC009949.1-201ENST00000623048 1830 ntBASIC21.26■□□□□ 0.99
RPAP1Q9BWH6 AL355312.1-201ENST00000407115 2176 ntBASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 MED15P5-201ENST00000423150 992 ntBASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 AC007967.3-201ENST00000434308 558 ntBASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 AC122714.2-201ENST00000502787 707 ntBASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 FZD10-202ENST00000539839 3282 ntBASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPAP1Q9BWH6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 LAGE3P1-201ENST00000425356 484 ntBASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 AC073592.4-201ENST00000623827 446 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms