Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 AC131212.4-201ENST00000623606 975 ntBASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 AC024909.3-201ENST00000611513 2257 ntBASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 AC046185.3-201ENST00000623228 1824 ntBASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC22CQ9BRL7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC016396.2-201ENST00000562575 1417 ntBASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SEC22CQ9BRL7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 AC009949.1-201ENST00000623048 1830 ntBASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SEC22CQ9BRL7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms