Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
USB1Q9BQ65 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 PCDHA12-202ENST00000613593 2588 ntBASIC15.72■□□□□ 0.11
USB1Q9BQ65 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USB1Q9BQ65 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 AC026396.1-201ENST00000419388 421 ntBASIC15.71■□□□□ 0.11
USB1Q9BQ65 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 DUTP2-201ENST00000519164 463 ntBASIC15.71■□□□□ 0.11
USB1Q9BQ65 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 AC138894.3-201ENST00000603787 634 ntBASIC15.71■□□□□ 0.11
USB1Q9BQ65 AC064862.7-201ENST00000604520 867 ntBASIC15.71■□□□□ 0.11
USB1Q9BQ65 AL591684.3-201ENST00000605187 298 ntBASIC15.71■□□□□ 0.11
USB1Q9BQ65 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
USB1Q9BQ65 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USB1Q9BQ65 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
USB1Q9BQ65 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
USB1Q9BQ65 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
USB1Q9BQ65 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
USB1Q9BQ65 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 AC112698.1-201ENST00000510299 916 ntBASIC15.7■□□□□ 0.1
USB1Q9BQ65 MIR5100-201ENST00000579544 119 ntBASIC15.7■□□□□ 0.1
USB1Q9BQ65 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms