Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 REXO1L11P-201ENST00000620964 1927 ntBASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 AC092183.1-201ENST00000469884 875 ntBASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85AQ96PX6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 AC092865.6-201ENST00000642101 219 ntBASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 ABALON-201ENST00000629058 1903 ntBASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85AQ96PX6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 BICD1-207ENST00000551848 1962 ntBASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 PTCHD3P3-201ENST00000403073 906 ntBASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 LINC00982-205ENST00000420957 435 ntBASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms