Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX27Q96L92 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.62
SNX27Q96L92 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX27Q96L92 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SNX27Q96L92 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX27Q96L92 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX27Q96L92 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 AC073621.1-201ENST00000392730 636 ntBASIC18.89■□□□□ 0.61
SNX27Q96L92 MIR940-201ENST00000401276 94 ntBASIC18.89■□□□□ 0.61
SNX27Q96L92 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX27Q96L92 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX27Q96L92 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX27Q96L92 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX27Q96L92 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX27Q96L92 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX27Q96L92 AC106730.1-201ENST00000566722 1090 ntBASIC18.89■□□□□ 0.61
SNX27Q96L92 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SNX27Q96L92 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNX27Q96L92 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 NCF1C-201ENST00000438382 1427 ntBASIC18.89■□□□□ 0.61
SNX27Q96L92 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNX27Q96L92 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNX27Q96L92 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SNX27Q96L92 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX27Q96L92 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.88■□□□□ 0.61
SNX27Q96L92 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.88■□□□□ 0.61
SNX27Q96L92 CYMP-203ENST00000474680 1263 ntBASIC18.88■□□□□ 0.61
SNX27Q96L92 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.88■□□□□ 0.61
SNX27Q96L92 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.88■□□□□ 0.61
SNX27Q96L92 AC004706.3-202ENST00000621574 984 ntBASIC18.88■□□□□ 0.61
SNX27Q96L92 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SNX27Q96L92 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNX27Q96L92 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SNX27Q96L92 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SNX27Q96L92 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX27Q96L92 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX27Q96L92 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms