Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 AP002383.4-201ENST00000442518 975 ntBASIC16.89■□□□□ 0.29
UBE2E3Q969T4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 LINC00265-3P-201ENST00000447588 903 ntBASIC16.89■□□□□ 0.29
UBE2E3Q969T4 KRT17P6-201ENST00000453795 1220 ntBASIC16.89■□□□□ 0.29
UBE2E3Q969T4 TOB2P1-201ENST00000469761 992 ntBASIC16.89■□□□□ 0.29
UBE2E3Q969T4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.89■□□□□ 0.29
UBE2E3Q969T4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 AC109462.3-201ENST00000573934 613 ntBASIC16.88■□□□□ 0.29
UBE2E3Q969T4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 AC011467.2-201ENST00000598425 242 ntBASIC16.88■□□□□ 0.29
UBE2E3Q969T4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 LYSMD4-203ENST00000378904 2122 ntBASIC16.88■□□□□ 0.29
UBE2E3Q969T4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2E3Q969T4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.87■□□□□ 0.29
UBE2E3Q969T4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.87■□□□□ 0.29
UBE2E3Q969T4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 AC019129.2-201ENST00000609837 1235 ntBASIC16.87■□□□□ 0.29
UBE2E3Q969T4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
UBE2E3Q969T4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2E3Q969T4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2E3Q969T4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
UBE2E3Q969T4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
UBE2E3Q969T4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2E3Q969T4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms