Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AC091304.2-201ENST00000564639 760 ntBASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AL353593.2-201ENST00000602529 1483 ntBASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 AD001527.2-201ENST00000622994 785 ntBASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC148Q8NFR7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CCDC148Q8NFR7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 KRT8P10-201ENST00000450021 1447 ntBASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 LINC01711-201ENST00000598340 967 ntBASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 AL732292.2-201ENST00000609649 430 ntBASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC148Q8NFR7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
CCDC148Q8NFR7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms