Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 DUSP5P1-201ENST00000441325 1139 ntBASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 AC002558.1-201ENST00000488906 803 ntBASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 IGHV3-52-201ENST00000519770 353 ntBASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 KRT8P10-201ENST00000450021 1447 ntBASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT1Q8NF37 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 AC111152.3-201ENST00000569699 673 ntBASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT1Q8NF37 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LPCAT1Q8NF37 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LPCAT1Q8NF37 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.71■□□□□ 0.42
LPCAT1Q8NF37 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LPCAT1Q8NF37 AL049757.1-201ENST00000616842 1596 ntBASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.7■□□□□ 0.42
LPCAT1Q8NF37 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms