Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNEP1R1Q8N9A8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNEP1R1Q8N9A8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CNEP1R1Q8N9A8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 IGHV3-52-201ENST00000519770 353 ntBASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CNEP1R1Q8N9A8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
CNEP1R1Q8N9A8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNEP1R1Q8N9A8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
CNEP1R1Q8N9A8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CNEP1R1Q8N9A8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 SPDYE21P-201ENST00000413323 827 ntBASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 AL020989.1-201ENST00000422979 469 ntBASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 KRT18P55-202ENST00000578578 1546 ntBASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 AL049757.1-201ENST00000616842 1596 ntBASIC15.58■□□□□ 0.08
CNEP1R1Q8N9A8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 RPL13AP23-201ENST00000480739 586 ntBASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CNEP1R1Q8N9A8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.56■□□□□ 0.08
CNEP1R1Q8N9A8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNEP1R1Q8N9A8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms