Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 HLA-J-201ENST00000462773 1622 ntBASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 KRT18P31-201ENST00000506277 1292 ntBASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 AC133963.1-201ENST00000504166 1679 ntBASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB42Q8N4Z0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 TSPY19P-201ENST00000418461 509 ntBASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 TSPY18P-201ENST00000441642 509 ntBASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB42Q8N4Z0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAB42Q8N4Z0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAB42Q8N4Z0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms