Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AL390955.1-201ENST00000428694 934 ntBASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 KRT18P48-201ENST00000434763 852 ntBASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AC124947.2-201ENST00000547118 1133 ntBASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AC097374.2-201ENST00000618617 1306 ntBASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 ECEL1P3-201ENST00000427961 737 ntBASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01561Q8N1V8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms