Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CARFQ8N187 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.59■□□□□ 0.25
CARFQ8N187 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.59■□□□□ 0.25
CARFQ8N187 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.58■□□□□ 0.25
CARFQ8N187 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.58■□□□□ 0.25
CARFQ8N187 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CARFQ8N187 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CARFQ8N187 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CARFQ8N187 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CARFQ8N187 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CARFQ8N187 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CARFQ8N187 MRPL20P1-201ENST00000400819 433 ntBASIC16.58■□□□□ 0.24
CARFQ8N187 PTCHD3P3-201ENST00000403073 906 ntBASIC16.58■□□□□ 0.24
CARFQ8N187 CRYGEP-201ENST00000412192 528 ntBASIC16.58■□□□□ 0.24
CARFQ8N187 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.58■□□□□ 0.24
CARFQ8N187 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.58■□□□□ 0.24
CARFQ8N187 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CARFQ8N187 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.58■□□□□ 0.24
CARFQ8N187 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.58■□□□□ 0.24
CARFQ8N187 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.58■□□□□ 0.24
CARFQ8N187 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.58■□□□□ 0.24
CARFQ8N187 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CARFQ8N187 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.58■□□□□ 0.24
CARFQ8N187 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 AL590787.1-201ENST00000568856 1315 ntBASIC16.58■□□□□ 0.24
CARFQ8N187 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
CARFQ8N187 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.58■□□□□ 0.24
CARFQ8N187 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CARFQ8N187 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.57■□□□□ 0.24
CARFQ8N187 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CARFQ8N187 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CARFQ8N187 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.57■□□□□ 0.24
CARFQ8N187 KRT18P13-201ENST00000400056 1290 ntBASIC16.57■□□□□ 0.24
CARFQ8N187 VN2R19P-201ENST00000442399 1052 ntBASIC16.57■□□□□ 0.24
CARFQ8N187 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.57■□□□□ 0.24
CARFQ8N187 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.57■□□□□ 0.24
CARFQ8N187 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CARFQ8N187 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.57■□□□□ 0.24
CARFQ8N187 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CARFQ8N187 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
CARFQ8N187 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CARFQ8N187 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CARFQ8N187 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.56■□□□□ 0.24
CARFQ8N187 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CARFQ8N187 BX842568.4-201ENST00000421222 227 ntBASIC16.56■□□□□ 0.24
CARFQ8N187 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.56■□□□□ 0.24
CARFQ8N187 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.56■□□□□ 0.24
CARFQ8N187 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.56■□□□□ 0.24
CARFQ8N187 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.56■□□□□ 0.24
CARFQ8N187 AC064836.3-201ENST00000607928 673 ntBASIC16.56■□□□□ 0.24
CARFQ8N187 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms