Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.86■□□□□ 0.45
CHPFQ8IZ52 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 KRT18P27-201ENST00000427733 1299 ntBASIC17.86■□□□□ 0.45
CHPFQ8IZ52 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 AC136632.2-201ENST00000512891 861 ntBASIC17.86■□□□□ 0.45
CHPFQ8IZ52 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 AL589182.2-201ENST00000619332 1049 ntBASIC17.86■□□□□ 0.45
CHPFQ8IZ52 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 PCDHB18P-201ENST00000524813 2368 ntBASIC17.86■□□□□ 0.45
CHPFQ8IZ52 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 KLF4P1-201ENST00000412782 1185 ntBASIC17.85■□□□□ 0.45
CHPFQ8IZ52 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 AC100803.2-201ENST00000562459 1963 ntBASIC17.85■□□□□ 0.45
CHPFQ8IZ52 AC040169.1-201ENST00000565382 521 ntBASIC17.85■□□□□ 0.45
CHPFQ8IZ52 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 AC132938.5-201ENST00000624980 1813 ntBASIC17.85■□□□□ 0.45
CHPFQ8IZ52 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHPFQ8IZ52 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 AC073621.1-201ENST00000392730 636 ntBASIC17.84■□□□□ 0.45
CHPFQ8IZ52 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms