Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 KRT18P21-201ENST00000515767 1272 ntBASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 LYSMD4-203ENST00000378904 2122 ntBASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 TSPY22P-201ENST00000427496 604 ntBASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 AC022211.2-201ENST00000585075 2527 ntBASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 AC009053.2-201ENST00000563701 2365 ntBASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00346Q8IVM7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 AC010460.3-201ENST00000511359 1579 ntBASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 PRORSD1P-202ENST00000563365 2154 ntBASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 GUSBP12-201ENST00000513727 720 ntBASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms