Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AP000525.1-201ENST00000608286 694 ntBASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 FLJ38576-201ENST00000623820 2459 ntBASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUDCD3Q8IVD9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NUDCD3Q8IVD9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 AL158047.1-201ENST00000445918 881 ntBASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 BX276092.7-203ENST00000637198 1536 ntBASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NUDCD3Q8IVD9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AC005915.1-201ENST00000624912 2018 ntBASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 PRORSD1P-201ENST00000295112 541 ntBASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms