Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 AL662844.4-201ENST00000606367 2838 ntBASIC14.62□□□□□ -0.07
ZNF546Q86UE3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 FLJ16779-201ENST00000612722 7638 ntBASIC14.62□□□□□ -0.07
ZNF546Q86UE3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 TSPY6P-201ENST00000448518 926 ntBASIC14.62□□□□□ -0.07
ZNF546Q86UE3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 AC016396.2-201ENST00000562575 1417 ntBASIC14.62□□□□□ -0.07
ZNF546Q86UE3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 NORAD-201ENST00000565493 5339 ntBASIC14.62□□□□□ -0.07
ZNF546Q86UE3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF546Q86UE3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 AC116353.5-201ENST00000638148 1699 ntBASIC14.61□□□□□ -0.07
ZNF546Q86UE3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 MIR149-201ENST00000384879 89 ntBASIC14.61□□□□□ -0.07
ZNF546Q86UE3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.61□□□□□ -0.07
ZNF546Q86UE3 GUSBP6-202ENST00000438529 1198 ntBASIC14.61□□□□□ -0.07
ZNF546Q86UE3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 DUTP2-201ENST00000519164 463 ntBASIC14.61□□□□□ -0.07
ZNF546Q86UE3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF546Q86UE3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms