Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AC097637.2-201ENST00000624096 1997 ntBASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 COX5BP2-201ENST00000392354 334 ntBASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 MIR6752-201ENST00000618442 71 ntBASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 AC004408.2-201ENST00000623613 2777 ntBASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 TREML5P-201ENST00000421694 576 ntBASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 CRB3P1-201ENST00000449338 276 ntBASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 AC109462.3-201ENST00000573934 613 ntBASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 TFAMP1-201ENST00000412727 736 ntBASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 LINC01225-203ENST00000563550 1244 ntBASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS13BQ7Z7G8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms