Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 GNAS-203ENST00000306120 1878 ntBASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFWD3Q6PCD5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 AL160237.2-201ENST00000556165 472 ntBASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 AC008608.2-201ENST00000606089 416 ntBASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFWD3Q6PCD5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AL645608.8-201ENST00000606034 2086 ntBASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms