Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 AC034236.2-201ENST00000606662 1610 ntBASIC13.29□□□□□ -0.28
MRPL54Q6P161 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 MIR149-201ENST00000384879 89 ntBASIC13.29□□□□□ -0.28
MRPL54Q6P161 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 AC092171.3-201ENST00000610122 2651 ntBASIC13.28□□□□□ -0.28
MRPL54Q6P161 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 DUSP5P2-201ENST00000426873 1033 ntBASIC13.28□□□□□ -0.28
MRPL54Q6P161 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL54Q6P161 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 AC005052.1-201ENST00000625181 2492 ntBASIC13.28□□□□□ -0.28
MRPL54Q6P161 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 AC022188.1-201ENST00000620960 1664 ntBASIC13.28□□□□□ -0.28
MRPL54Q6P161 AC105917.1-201ENST00000506637 2539 ntBASIC13.28□□□□□ -0.28
MRPL54Q6P161 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL54Q6P161 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
MRPL54Q6P161 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms