Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC034236.2-201ENST00000606662 1610 ntBASIC16.19■□□□□ 0.18
ZNF544Q6NX49 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 REXO1L9P-201ENST00000604264 2108 ntBASIC16.19■□□□□ 0.18
ZNF544Q6NX49 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 MIR564-202ENST00000385049 94 ntBASIC16.19■□□□□ 0.18
ZNF544Q6NX49 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 AL031133.1-201ENST00000406807 723 ntBASIC16.19■□□□□ 0.18
ZNF544Q6NX49 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 MIR4674-201ENST00000582457 87 ntBASIC16.19■□□□□ 0.18
ZNF544Q6NX49 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.19■□□□□ 0.18
ZNF544Q6NX49 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
ZNF544Q6NX49 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 FLJ16779-201ENST00000612722 7638 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 AC103702.1-201ENST00000548801 2630 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 UBALD1-205ENST00000590891 2641 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 CR769767.2-201ENST00000622735 460 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 AL121956.5-201ENST00000625261 221 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 AP001094.4-201ENST00000579008 2176 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 AL023806.1-201ENST00000603994 1649 ntBASIC16.18■□□□□ 0.18
ZNF544Q6NX49 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF544Q6NX49 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 PCDHB19P-201ENST00000570871 2371 ntBASIC16.17■□□□□ 0.18
ZNF544Q6NX49 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF544Q6NX49 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms