Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AC006116.8-202ENST00000587620 1550 ntBASIC18.56■□□□□ 0.56
DSC1Q08554 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
DSC1Q08554 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.56■□□□□ 0.56
DSC1Q08554 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.56■□□□□ 0.56
DSC1Q08554 PAWRP1-201ENST00000451083 565 ntBASIC18.56■□□□□ 0.56
DSC1Q08554 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.56■□□□□ 0.56
DSC1Q08554 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DSC1Q08554 KRT19P2-202ENST00000557173 1012 ntBASIC18.56■□□□□ 0.56
DSC1Q08554 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
DSC1Q08554 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.56■□□□□ 0.56
DSC1Q08554 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DSC1Q08554 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DSC1Q08554 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.56■□□□□ 0.56
DSC1Q08554 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.56■□□□□ 0.56
DSC1Q08554 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DSC1Q08554 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.56■□□□□ 0.56
DSC1Q08554 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.55■□□□□ 0.56
DSC1Q08554 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
DSC1Q08554 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 MKNK2P1-201ENST00000437526 628 ntBASIC18.55■□□□□ 0.56
DSC1Q08554 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.55■□□□□ 0.56
DSC1Q08554 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.55■□□□□ 0.56
DSC1Q08554 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.55■□□□□ 0.56
DSC1Q08554 MIR4469-201ENST00000583919 79 ntBASIC18.55■□□□□ 0.56
DSC1Q08554 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DSC1Q08554 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.55■□□□□ 0.56
DSC1Q08554 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.55■□□□□ 0.56
DSC1Q08554 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DSC1Q08554 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DSC1Q08554 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DSC1Q08554 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DSC1Q08554 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DSC1Q08554 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.54■□□□□ 0.56
DSC1Q08554 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DSC1Q08554 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.54■□□□□ 0.56
DSC1Q08554 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.54■□□□□ 0.56
DSC1Q08554 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.54■□□□□ 0.56
DSC1Q08554 HTR5BP-201ENST00000430851 1154 ntBASIC18.54■□□□□ 0.56
DSC1Q08554 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.54■□□□□ 0.56
DSC1Q08554 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.54■□□□□ 0.56
DSC1Q08554 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
DSC1Q08554 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.54■□□□□ 0.56
DSC1Q08554 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DSC1Q08554 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.54■□□□□ 0.56
DSC1Q08554 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 AC135050.7-201ENST00000624508 2218 ntBASIC18.54■□□□□ 0.56
DSC1Q08554 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
DSC1Q08554 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DSC1Q08554 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DSC1Q08554 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DSC1Q08554 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DSC1Q08554 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DSC1Q08554 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DSC1Q08554 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.53■□□□□ 0.56
DSC1Q08554 BCAR1-209ENST00000546196 1340 ntBASIC18.53■□□□□ 0.56
DSC1Q08554 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DSC1Q08554 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.53■□□□□ 0.56
DSC1Q08554 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DSC1Q08554 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DSC1Q08554 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DSC1Q08554 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DSC1Q08554 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.53■□□□□ 0.56
DSC1Q08554 SLC25A6P5-201ENST00000435663 894 ntBASIC18.53■□□□□ 0.56
DSC1Q08554 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.53■□□□□ 0.56
DSC1Q08554 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
DSC1Q08554 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.53■□□□□ 0.56
DSC1Q08554 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms