Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.44□□□□□ -0.42
RPL39P62891 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 CRYGFP-201ENST00000418459 633 ntBASIC12.44□□□□□ -0.42
RPL39P62891 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.44□□□□□ -0.42
RPL39P62891 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.44□□□□□ -0.42
RPL39P62891 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.44□□□□□ -0.42
RPL39P62891 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 MIR3180-4-201ENST00000582223 153 ntBASIC12.44□□□□□ -0.42
RPL39P62891 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.44□□□□□ -0.42
RPL39P62891 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.44□□□□□ -0.42
RPL39P62891 CD177P1-201ENST00000606252 935 ntBASIC12.44□□□□□ -0.42
RPL39P62891 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.44□□□□□ -0.42
RPL39P62891 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
RPL39P62891 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.44□□□□□ -0.42
RPL39P62891 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 LINC00167-201ENST00000530583 1419 ntBASIC12.44□□□□□ -0.42
RPL39P62891 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.44□□□□□ -0.42
RPL39P62891 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 HYMAI-201ENST00000635591 3347 ntBASIC12.44□□□□□ -0.42
RPL39P62891 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.43□□□□□ -0.42
RPL39P62891 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 AP003041.3-201ENST00000527151 707 ntBASIC12.43□□□□□ -0.42
RPL39P62891 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.43□□□□□ -0.42
RPL39P62891 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.43□□□□□ -0.42
RPL39P62891 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
RPL39P62891 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RPL39P62891 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.43□□□□□ -0.42
RPL39P62891 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
RPL39P62891 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.43□□□□□ -0.42
RPL39P62891 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms