Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SNRPEP62304 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.45□□□□□ -0.26
SNRPEP62304 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SNRPEP62304 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNRPEP62304 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.45□□□□□ -0.26
SNRPEP62304 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.45□□□□□ -0.26
SNRPEP62304 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SNRPEP62304 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.45□□□□□ -0.26
SNRPEP62304 ABHD17AP4-201ENST00000411545 909 ntBASIC13.45□□□□□ -0.26
SNRPEP62304 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC13.45□□□□□ -0.26
SNRPEP62304 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SNRPEP62304 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNRPEP62304 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.45□□□□□ -0.26
SNRPEP62304 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNRPEP62304 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNRPEP62304 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SNRPEP62304 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SNRPEP62304 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.44□□□□□ -0.26
SNRPEP62304 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.44□□□□□ -0.26
SNRPEP62304 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC13.44□□□□□ -0.26
SNRPEP62304 MIR4508-201ENST00000584178 70 ntBASIC13.44□□□□□ -0.26
SNRPEP62304 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.44□□□□□ -0.26
SNRPEP62304 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.44□□□□□ -0.26
SNRPEP62304 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC13.44□□□□□ -0.26
SNRPEP62304 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNRPEP62304 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SNRPEP62304 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SNRPEP62304 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.43□□□□□ -0.26
SNRPEP62304 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.43□□□□□ -0.26
SNRPEP62304 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SNRPEP62304 RCC2P6-201ENST00000526625 1557 ntBASIC13.43□□□□□ -0.26
SNRPEP62304 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.43□□□□□ -0.26
SNRPEP62304 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.43□□□□□ -0.26
SNRPEP62304 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 TK2-216ENST00000564917 1156 ntTSL 3 BASIC13.43□□□□□ -0.26
SNRPEP62304 LINC00304-203ENST00000565008 1864 ntBASIC13.43□□□□□ -0.26
SNRPEP62304 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.43□□□□□ -0.26
SNRPEP62304 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNRPEP62304 MTDHP2-201ENST00000601468 714 ntBASIC13.43□□□□□ -0.26
SNRPEP62304 AC068587.9-201ENST00000641814 219 ntBASIC13.43□□□□□ -0.26
SNRPEP62304 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SNRPEP62304 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms