Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
USP46P62068 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
USP46P62068 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.46■□□□□ 0.55
USP46P62068 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.46■□□□□ 0.55
USP46P62068 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.46■□□□□ 0.55
USP46P62068 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.46■□□□□ 0.55
USP46P62068 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USP46P62068 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.46■□□□□ 0.55
USP46P62068 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 SIGLEC16-201ENST00000599858 1437 ntBASIC18.46■□□□□ 0.55
USP46P62068 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP46P62068 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
USP46P62068 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.46■□□□□ 0.54
USP46P62068 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP46P62068 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
USP46P62068 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
USP46P62068 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.45■□□□□ 0.54
USP46P62068 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.45■□□□□ 0.54
USP46P62068 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.45■□□□□ 0.54
USP46P62068 AL022326.1-202ENST00000641533 845 ntBASIC18.45■□□□□ 0.54
USP46P62068 AC107918.4-202ENST00000641623 219 ntBASIC18.45■□□□□ 0.54
USP46P62068 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.45■□□□□ 0.54
USP46P62068 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP46P62068 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USP46P62068 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.45■□□□□ 0.54
USP46P62068 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP46P62068 AL139384.1-201ENST00000612143 3047 ntBASIC18.44■□□□□ 0.54
USP46P62068 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USP46P62068 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
USP46P62068 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.44■□□□□ 0.54
USP46P62068 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.44■□□□□ 0.54
USP46P62068 AC093909.1-201ENST00000504731 1122 ntBASIC18.44■□□□□ 0.54
USP46P62068 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.44■□□□□ 0.54
USP46P62068 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USP46P62068 AL589935.2-201ENST00000616471 1231 ntBASIC18.44■□□□□ 0.54
USP46P62068 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.44■□□□□ 0.54
USP46P62068 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 HCG11-201ENST00000411553 5696 ntBASIC18.44■□□□□ 0.54
USP46P62068 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USP46P62068 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.44■□□□□ 0.54
USP46P62068 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.44■□□□□ 0.54
USP46P62068 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.44■□□□□ 0.54
USP46P62068 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP46P62068 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
USP46P62068 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USP46P62068 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
USP46P62068 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.43■□□□□ 0.54
USP46P62068 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms