Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 B3GAT3P1-201ENST00000471720 806 ntBASIC13.91□□□□□ -0.18
CDC34P49427 AC011506.1-201ENST00000474329 610 ntBASIC13.91□□□□□ -0.18
CDC34P49427 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.91□□□□□ -0.18
CDC34P49427 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.91□□□□□ -0.18
CDC34P49427 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.91□□□□□ -0.18
CDC34P49427 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 AC110285.5-201ENST00000611501 352 ntBASIC13.91□□□□□ -0.18
CDC34P49427 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC34P49427 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CDC34P49427 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC34P49427 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDC34P49427 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC34P49427 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.91□□□□□ -0.18
CDC34P49427 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC34P49427 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 AC005915.1-201ENST00000624912 2018 ntBASIC13.9□□□□□ -0.18
CDC34P49427 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CDC34P49427 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 AC233263.1-201ENST00000578059 224 ntBASIC13.9□□□□□ -0.18
CDC34P49427 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CDC34P49427 AP000692.2-201ENST00000608391 879 ntBASIC13.9□□□□□ -0.18
CDC34P49427 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC34P49427 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDC34P49427 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC34P49427 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC34P49427 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDC34P49427 AC009949.1-201ENST00000623048 1830 ntBASIC13.9□□□□□ -0.18
CDC34P49427 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CDC34P49427 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CDC34P49427 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CDC34P49427 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.9□□□□□ -0.19
CDC34P49427 AC126755.1-201ENST00000525846 6405 ntBASIC13.9□□□□□ -0.19
CDC34P49427 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.89□□□□□ -0.19
CDC34P49427 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.89□□□□□ -0.19
CDC34P49427 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 AC124016.1-201ENST00000609552 612 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms