Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.32■□□□□ 0.04
GDNFP39905 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GDNFP39905 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 AL603756.1-201ENST00000606511 2163 ntBASIC15.32■□□□□ 0.04
GDNFP39905 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.31■□□□□ 0.04
GDNFP39905 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.31■□□□□ 0.04
GDNFP39905 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.31■□□□□ 0.04
GDNFP39905 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.31■□□□□ 0.04
GDNFP39905 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.31■□□□□ 0.04
GDNFP39905 DUTP2-201ENST00000519164 463 ntBASIC15.31■□□□□ 0.04
GDNFP39905 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.31■□□□□ 0.04
GDNFP39905 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
GDNFP39905 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.31■□□□□ 0.04
GDNFP39905 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GDNFP39905 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.31■□□□□ 0.04
GDNFP39905 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GDNFP39905 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
GDNFP39905 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GDNFP39905 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDNFP39905 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 AL596257.1-201ENST00000641463 2694 ntBASIC15.3■□□□□ 0.04
GDNFP39905 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.3■□□□□ 0.04
GDNFP39905 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms