Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT20P35900 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT20P35900 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
KRT20P35900 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT20P35900 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT20P35900 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
KRT20P35900 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
KRT20P35900 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT20P35900 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
KRT20P35900 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT20P35900 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT20P35900 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT20P35900 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT20P35900 KRT18P35-201ENST00000510488 1269 ntBASIC16.73■□□□□ 0.27
KRT20P35900 AL136038.3-201ENST00000561909 1096 ntBASIC16.73■□□□□ 0.27
KRT20P35900 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
KRT20P35900 GPR32P1-201ENST00000601788 811 ntBASIC16.73■□□□□ 0.27
KRT20P35900 AC011676.5-201ENST00000624864 2660 ntBASIC16.73■□□□□ 0.27
KRT20P35900 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT20P35900 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT20P35900 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KRT20P35900 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.72■□□□□ 0.27
KRT20P35900 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KRT20P35900 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT20P35900 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT20P35900 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT20P35900 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.72■□□□□ 0.27
KRT20P35900 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT20P35900 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT20P35900 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KRT20P35900 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT20P35900 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT20P35900 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT20P35900 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms