Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 AL365209.1-201ENST00000624418 6473 ntBASIC15.78■□□□□ 0.12
SOX6P35712 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.78■□□□□ 0.12
SOX6P35712 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 KRT17P3-201ENST00000420566 1262 ntBASIC15.78■□□□□ 0.12
SOX6P35712 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.78■□□□□ 0.12
SOX6P35712 DUTP2-201ENST00000519164 463 ntBASIC15.78■□□□□ 0.12
SOX6P35712 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 AC006449.5-201ENST00000610658 2098 ntBASIC15.78■□□□□ 0.12
SOX6P35712 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SOX6P35712 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 AL163051.1-201ENST00000569214 1512 ntBASIC15.78■□□□□ 0.12
SOX6P35712 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX6P35712 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX6P35712 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX6P35712 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.77■□□□□ 0.12
SOX6P35712 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SOX6P35712 AC067930.6-201ENST00000623257 4947 ntBASIC15.77■□□□□ 0.12
SOX6P35712 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SOX6P35712 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.77■□□□□ 0.12
SOX6P35712 AC005915.1-201ENST00000624912 2018 ntBASIC15.77■□□□□ 0.12
SOX6P35712 LINC00554-201ENST00000564841 3011 ntBASIC15.77■□□□□ 0.12
SOX6P35712 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SOX6P35712 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.77■□□□□ 0.12
SOX6P35712 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX6P35712 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX6P35712 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.77■□□□□ 0.12
SOX6P35712 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 FAM201B-201ENST00000458407 597 ntBASIC15.77■□□□□ 0.12
SOX6P35712 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX6P35712 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX6P35712 AC004264.1-201ENST00000608354 794 ntBASIC15.77■□□□□ 0.12
SOX6P35712 CYP2T1P-202ENST00000641596 2535 ntBASIC15.77■□□□□ 0.12
SOX6P35712 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SOX6P35712 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SOX6P35712 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.77■□□□□ 0.11
SOX6P35712 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SOX6P35712 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SOX6P35712 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.77■□□□□ 0.11
SOX6P35712 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.77■□□□□ 0.11
SOX6P35712 AL513523.2-202ENST00000427283 2040 ntBASIC15.77■□□□□ 0.11
SOX6P35712 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SOX6P35712 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.77■□□□□ 0.11
SOX6P35712 AC016396.2-201ENST00000562575 1417 ntBASIC15.77■□□□□ 0.11
SOX6P35712 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX6P35712 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX6P35712 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX6P35712 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
SOX6P35712 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX6P35712 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX6P35712 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX6P35712 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms