Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC8P31273 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 AC006116.8-202ENST00000587620 1550 ntBASIC19.01■□□□□ 0.63
HOXC8P31273 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19■□□□□ 0.63
HOXC8P31273 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HOXC8P31273 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19■□□□□ 0.63
HOXC8P31273 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC8P31273 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19■□□□□ 0.63
HOXC8P31273 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC8P31273 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC8P31273 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC8P31273 AC004461.1-201ENST00000412461 403 ntBASIC18.99■□□□□ 0.63
HOXC8P31273 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC8P31273 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC8P31273 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.99■□□□□ 0.63
HOXC8P31273 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.99■□□□□ 0.63
HOXC8P31273 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXC8P31273 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HOXC8P31273 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HOXC8P31273 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC8P31273 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC8P31273 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC8P31273 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC8P31273 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
HOXC8P31273 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.98■□□□□ 0.63
HOXC8P31273 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC8P31273 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
HOXC8P31273 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
HOXC8P31273 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXC8P31273 AC022145.2-201ENST00000598203 171 ntBASIC18.98■□□□□ 0.63
HOXC8P31273 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXC8P31273 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC8P31273 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
HOXC8P31273 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC8P31273 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC8P31273 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC8P31273 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC8P31273 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC8P31273 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HOXC8P31273 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HOXC8P31273 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms