Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS1P17812 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS1P17812 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS1P17812 IGHV3-52-201ENST00000519770 353 ntBASIC17.65■□□□□ 0.42
CTPS1P17812 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.65■□□□□ 0.42
CTPS1P17812 MTDHP3-201ENST00000594186 672 ntBASIC17.65■□□□□ 0.42
CTPS1P17812 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTPS1P17812 AL691432.3-201ENST00000621860 400 ntBASIC17.65■□□□□ 0.42
CTPS1P17812 AC073592.5-201ENST00000624854 528 ntBASIC17.65■□□□□ 0.42
CTPS1P17812 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS1P17812 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS1P17812 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS1P17812 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.64■□□□□ 0.42
CTPS1P17812 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.64■□□□□ 0.42
CTPS1P17812 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.64■□□□□ 0.42
CTPS1P17812 AP005117.1-201ENST00000584346 1413 ntBASIC17.64■□□□□ 0.42
CTPS1P17812 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.64■□□□□ 0.42
CTPS1P17812 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CTPS1P17812 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS1P17812 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS1P17812 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTPS1P17812 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CTPS1P17812 AC005104.2-201ENST00000427818 678 ntBASIC17.64■□□□□ 0.41
CTPS1P17812 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.64■□□□□ 0.41
CTPS1P17812 SAPCD2P3-201ENST00000455031 850 ntBASIC17.64■□□□□ 0.41
CTPS1P17812 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.64■□□□□ 0.41
CTPS1P17812 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.64■□□□□ 0.41
CTPS1P17812 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.64■□□□□ 0.41
CTPS1P17812 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CTPS1P17812 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.64■□□□□ 0.41
CTPS1P17812 AC008608.2-201ENST00000606089 416 ntBASIC17.64■□□□□ 0.41
CTPS1P17812 LINC01451-201ENST00000623792 534 ntBASIC17.64■□□□□ 0.41
CTPS1P17812 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS1P17812 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.64■□□□□ 0.41
CTPS1P17812 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.64■□□□□ 0.41
CTPS1P17812 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 HLA-J-201ENST00000462773 1622 ntBASIC17.64■□□□□ 0.41
CTPS1P17812 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS1P17812 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS1P17812 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 AL353593.2-201ENST00000602529 1483 ntBASIC17.63■□□□□ 0.41
CTPS1P17812 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS1P17812 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.63■□□□□ 0.41
CTPS1P17812 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS1P17812 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CTPS1P17812 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 AC004870.1-201ENST00000315132 882 ntBASIC17.63■□□□□ 0.41
CTPS1P17812 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS1P17812 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS1P17812 AC079781.3-201ENST00000449110 356 ntBASIC17.63■□□□□ 0.41
CTPS1P17812 AC002558.1-201ENST00000488906 803 ntBASIC17.63■□□□□ 0.41
CTPS1P17812 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS1P17812 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS1P17812 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS1P17812 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.63■□□□□ 0.41
CTPS1P17812 AP000867.4-201ENST00000641616 219 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms