Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LINC02084-201ENST00000606069 1096 ntBASIC16.49■□□□□ 0.23
CCL4P13236 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCL4P13236 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CCL4P13236 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCL4P13236 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 KRT18P55-202ENST00000578578 1546 ntBASIC16.49■□□□□ 0.23
CCL4P13236 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 AC104581.1-202ENST00000635932 2618 ntBASIC16.49■□□□□ 0.23
CCL4P13236 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.48■□□□□ 0.23
CCL4P13236 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCL4P13236 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 AL590787.1-201ENST00000568856 1315 ntBASIC16.48■□□□□ 0.23
CCL4P13236 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCL4P13236 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCL4P13236 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCL4P13236 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCL4P13236 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL4P13236 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL4P13236 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 AC074386.1-202ENST00000463561 864 ntBASIC16.48■□□□□ 0.23
CCL4P13236 RFPL4AP1-201ENST00000530883 850 ntBASIC16.48■□□□□ 0.23
CCL4P13236 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL4P13236 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.48■□□□□ 0.23
CCL4P13236 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL4P13236 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL4P13236 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.48■□□□□ 0.23
CCL4P13236 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL4P13236 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.48■□□□□ 0.23
CCL4P13236 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL4P13236 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 CYMP-203ENST00000474680 1263 ntBASIC16.47■□□□□ 0.23
CCL4P13236 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.47■□□□□ 0.23
CCL4P13236 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 AP002472.1-201ENST00000577490 586 ntBASIC16.47■□□□□ 0.23
CCL4P13236 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 AC023141.13-201ENST00000604991 943 ntBASIC16.47■□□□□ 0.23
CCL4P13236 AC090164.3-201ENST00000610780 2143 ntBASIC16.47■□□□□ 0.23
CCL4P13236 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCL4P13236 AC007064.4-201ENST00000637740 555 ntBASIC16.47■□□□□ 0.23
CCL4P13236 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.47■□□□□ 0.23
CCL4P13236 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 AC004408.2-201ENST00000623613 2777 ntBASIC16.47■□□□□ 0.23
CCL4P13236 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.47■□□□□ 0.23
CCL4P13236 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL4P13236 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCL4P13236 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
CCL4P13236 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCL4P13236 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCL4P13236 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.46■□□□□ 0.23
CCL4P13236 ACTG1P4-201ENST00000425123 1122 ntBASIC16.46■□□□□ 0.23
CCL4P13236 CXCL1P1-201ENST00000502804 216 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms