Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.79■□□□□ 0.28
BCKDHAP12694 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BCKDHAP12694 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BCKDHAP12694 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.79■□□□□ 0.28
BCKDHAP12694 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.79■□□□□ 0.28
BCKDHAP12694 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BCKDHAP12694 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 AC002558.1-201ENST00000488906 803 ntBASIC16.79■□□□□ 0.28
BCKDHAP12694 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.79■□□□□ 0.28
BCKDHAP12694 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.79■□□□□ 0.28
BCKDHAP12694 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BCKDHAP12694 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
BCKDHAP12694 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.79■□□□□ 0.28
BCKDHAP12694 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.79■□□□□ 0.28
BCKDHAP12694 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BCKDHAP12694 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHAP12694 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 PKD1P1-201ENST00000458669 6805 ntBASIC16.78■□□□□ 0.28
BCKDHAP12694 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 AC104076.2-201ENST00000448912 469 ntBASIC16.78■□□□□ 0.28
BCKDHAP12694 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.78■□□□□ 0.28
BCKDHAP12694 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.78■□□□□ 0.28
BCKDHAP12694 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 AC083849.1-201ENST00000615227 514 ntBASIC16.78■□□□□ 0.28
BCKDHAP12694 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.78■□□□□ 0.28
BCKDHAP12694 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BCKDHAP12694 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.78■□□□□ 0.28
BCKDHAP12694 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
BCKDHAP12694 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.77■□□□□ 0.28
BCKDHAP12694 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.77■□□□□ 0.28
BCKDHAP12694 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BCKDHAP12694 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
BCKDHAP12694 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.77■□□□□ 0.28
BCKDHAP12694 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
BCKDHAP12694 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.77■□□□□ 0.28
BCKDHAP12694 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
BCKDHAP12694 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.77■□□□□ 0.28
BCKDHAP12694 AC063952.2-201ENST00000498792 1227 ntBASIC16.77■□□□□ 0.28
BCKDHAP12694 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.77■□□□□ 0.28
BCKDHAP12694 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.77■□□□□ 0.28
BCKDHAP12694 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.77■□□□□ 0.28
BCKDHAP12694 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BCKDHAP12694 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.77■□□□□ 0.28
BCKDHAP12694 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BCKDHAP12694 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BCKDHAP12694 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BCKDHAP12694 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BCKDHAP12694 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BCKDHAP12694 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.76■□□□□ 0.27
BCKDHAP12694 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BCKDHAP12694 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BCKDHAP12694 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.76■□□□□ 0.27
BCKDHAP12694 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BCKDHAP12694 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BCKDHAP12694 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.76■□□□□ 0.27
BCKDHAP12694 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
BCKDHAP12694 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BCKDHAP12694 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BCKDHAP12694 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BCKDHAP12694 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BCKDHAP12694 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BCKDHAP12694 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms