Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
CD4P01730 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CD4P01730 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.31■□□□□ 0.68
CD4P01730 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.31■□□□□ 0.68
CD4P01730 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.31■□□□□ 0.68
CD4P01730 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.31■□□□□ 0.68
CD4P01730 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.31■□□□□ 0.68
CD4P01730 STK25P1-201ENST00000585406 838 ntBASIC19.31■□□□□ 0.68
CD4P01730 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.31■□□□□ 0.68
CD4P01730 AL353135.1-201ENST00000606729 504 ntBASIC19.31■□□□□ 0.68
CD4P01730 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CD4P01730 AL513210.1-201ENST00000629608 234 ntBASIC19.31■□□□□ 0.68
CD4P01730 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CD4P01730 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.31■□□□□ 0.68
CD4P01730 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.3■□□□□ 0.68
CD4P01730 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.3■□□□□ 0.68
CD4P01730 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.3■□□□□ 0.68
CD4P01730 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.3■□□□□ 0.68
CD4P01730 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.3■□□□□ 0.68
CD4P01730 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.3■□□□□ 0.68
CD4P01730 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.3■□□□□ 0.68
CD4P01730 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.3■□□□□ 0.68
CD4P01730 AC109462.3-201ENST00000573934 613 ntBASIC19.3■□□□□ 0.68
CD4P01730 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.3■□□□□ 0.68
CD4P01730 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.3■□□□□ 0.68
CD4P01730 AC091812.2-201ENST00000619081 385 ntBASIC19.3■□□□□ 0.68
CD4P01730 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.3■□□□□ 0.68
CD4P01730 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.3■□□□□ 0.68
CD4P01730 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD4P01730 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.29■□□□□ 0.68
CD4P01730 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CD4P01730 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.29■□□□□ 0.68
CD4P01730 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CD4P01730 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.29■□□□□ 0.68
CD4P01730 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 AL096865.1-201ENST00000606796 927 ntBASIC19.29■□□□□ 0.68
CD4P01730 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CD4P01730 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.29■□□□□ 0.68
CD4P01730 AC092902.6-201ENST00000641783 218 ntBASIC19.29■□□□□ 0.68
CD4P01730 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.29■□□□□ 0.68
CD4P01730 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.29■□□□□ 0.68
CD4P01730 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.29■□□□□ 0.68
CD4P01730 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CD4P01730 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms