Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDRT1O95170 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDRT1O95170 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CDRT1O95170 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDRT1O95170 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 NFIC-211ENST00000641145 8399 ntBASIC15.69■□□□□ 0.1
CDRT1O95170 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.69■□□□□ 0.1
CDRT1O95170 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.69■□□□□ 0.1
CDRT1O95170 HYMAI-201ENST00000635591 3347 ntBASIC15.69■□□□□ 0.1
CDRT1O95170 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.69■□□□□ 0.1
CDRT1O95170 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.69■□□□□ 0.1
CDRT1O95170 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.69■□□□□ 0.1
CDRT1O95170 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.69■□□□□ 0.1
CDRT1O95170 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDRT1O95170 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 KRT18P29-201ENST00000397031 1267 ntBASIC15.69■□□□□ 0.1
CDRT1O95170 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDRT1O95170 NUDT16P1-203ENST00000513809 620 ntBASIC15.69■□□□□ 0.1
CDRT1O95170 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.69■□□□□ 0.1
CDRT1O95170 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.69■□□□□ 0.1
CDRT1O95170 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.69■□□□□ 0.1
CDRT1O95170 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.69■□□□□ 0.1
CDRT1O95170 DGCR10-201ENST00000609839 495 ntBASIC15.69■□□□□ 0.1
CDRT1O95170 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
CDRT1O95170 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDRT1O95170 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 AC132938.6-201ENST00000623828 1655 ntBASIC15.69■□□□□ 0.1
CDRT1O95170 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDRT1O95170 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDRT1O95170 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 REXO1L11P-201ENST00000620964 1927 ntBASIC15.68■□□□□ 0.1
CDRT1O95170 AC026691.1-201ENST00000602502 2017 ntBASIC15.68■□□□□ 0.1
CDRT1O95170 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.68■□□□□ 0.1
CDRT1O95170 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 CRYGFP-201ENST00000418459 633 ntBASIC15.68■□□□□ 0.1
CDRT1O95170 AC116562.2-201ENST00000507042 360 ntBASIC15.68■□□□□ 0.1
CDRT1O95170 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 MIR3180-5-201ENST00000583743 153 ntBASIC15.68■□□□□ 0.1
CDRT1O95170 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.68■□□□□ 0.1
CDRT1O95170 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDRT1O95170 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDRT1O95170 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDRT1O95170 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms