Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.46■□□□□ 0.39
TM9SF1O15321 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.46■□□□□ 0.39
TM9SF1O15321 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
TM9SF1O15321 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF1O15321 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TM9SF1O15321 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TM9SF1O15321 AC093525.9-201ENST00000624961 1746 ntBASIC17.46■□□□□ 0.39
TM9SF1O15321 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF1O15321 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.46■□□□□ 0.39
TM9SF1O15321 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.46■□□□□ 0.39
TM9SF1O15321 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TM9SF1O15321 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TM9SF1O15321 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TM9SF1O15321 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.45■□□□□ 0.38
TM9SF1O15321 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 SLC25A1P3-201ENST00000395415 828 ntBASIC17.45■□□□□ 0.38
TM9SF1O15321 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
TM9SF1O15321 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TM9SF1O15321 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TM9SF1O15321 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM9SF1O15321 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.44■□□□□ 0.38
TM9SF1O15321 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.44■□□□□ 0.38
TM9SF1O15321 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TM9SF1O15321 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 AL162727.3-201ENST00000635661 2787 ntBASIC17.44■□□□□ 0.38
TM9SF1O15321 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 CD99P1-205ENST00000527459 561 ntBASIC17.44■□□□□ 0.38
TM9SF1O15321 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.44■□□□□ 0.38
TM9SF1O15321 AC009154.2-201ENST00000621177 724 ntBASIC17.44■□□□□ 0.38
TM9SF1O15321 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.44■□□□□ 0.38
TM9SF1O15321 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM9SF1O15321 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.44■□□□□ 0.38
TM9SF1O15321 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF1O15321 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF1O15321 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.43■□□□□ 0.38
TM9SF1O15321 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF1O15321 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms