Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 AL645608.8-201ENST00000606034 2086 ntBASIC17.37■□□□□ 0.37
IFRD1O00458 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
IFRD1O00458 DDX43P3-201ENST00000441064 443 ntBASIC17.37■□□□□ 0.37
IFRD1O00458 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.37■□□□□ 0.37
IFRD1O00458 BNIP3P18-201ENST00000593976 575 ntBASIC17.37■□□□□ 0.37
IFRD1O00458 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.37■□□□□ 0.37
IFRD1O00458 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.37■□□□□ 0.37
IFRD1O00458 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFRD1O00458 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IFRD1O00458 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
IFRD1O00458 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 AC009949.1-201ENST00000623048 1830 ntBASIC17.36■□□□□ 0.37
IFRD1O00458 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.36■□□□□ 0.37
IFRD1O00458 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 KRT16P4-201ENST00000453883 522 ntBASIC17.36■□□□□ 0.37
IFRD1O00458 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.36■□□□□ 0.37
IFRD1O00458 AC091304.2-201ENST00000564639 760 ntBASIC17.36■□□□□ 0.37
IFRD1O00458 AC114341.1-201ENST00000618070 349 ntBASIC17.36■□□□□ 0.37
IFRD1O00458 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IFRD1O00458 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.36■□□□□ 0.37
IFRD1O00458 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.36■□□□□ 0.37
IFRD1O00458 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IFRD1O00458 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFRD1O00458 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 FAM220CP-201ENST00000395253 831 ntBASIC17.35■□□□□ 0.37
IFRD1O00458 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
IFRD1O00458 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 AC007967.3-201ENST00000434308 558 ntBASIC17.35■□□□□ 0.37
IFRD1O00458 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.35■□□□□ 0.37
IFRD1O00458 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.35■□□□□ 0.37
IFRD1O00458 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.35■□□□□ 0.37
IFRD1O00458 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 AC012313.10-201ENST00000623509 926 ntBASIC17.35■□□□□ 0.37
IFRD1O00458 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
IFRD1O00458 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 BX276092.7-203ENST00000637198 1536 ntBASIC17.35■□□□□ 0.37
IFRD1O00458 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.35■□□□□ 0.37
IFRD1O00458 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IFRD1O00458 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFRD1O00458 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFRD1O00458 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFRD1O00458 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFRD1O00458 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms