Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NFKBIEO00221 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKBIEO00221 PIN1P1-201ENST00000412108 996 ntBASIC20.99■□□□□ 0.95
NFKBIEO00221 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKBIEO00221 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.99■□□□□ 0.95
NFKBIEO00221 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.99■□□□□ 0.95
NFKBIEO00221 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKBIEO00221 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.99■□□□□ 0.95
NFKBIEO00221 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NFKBIEO00221 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKBIEO00221 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.98■□□□□ 0.95
NFKBIEO00221 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.98■□□□□ 0.95
NFKBIEO00221 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKBIEO00221 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKBIEO00221 ARSEP1-201ENST00000420443 635 ntBASIC20.98■□□□□ 0.95
NFKBIEO00221 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.98■□□□□ 0.95
NFKBIEO00221 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKBIEO00221 MIR4515-201ENST00000584082 81 ntBASIC20.98■□□□□ 0.95
NFKBIEO00221 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKBIEO00221 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
NFKBIEO00221 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.98■□□□□ 0.95
NFKBIEO00221 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKBIEO00221 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKBIEO00221 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NFKBIEO00221 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKBIEO00221 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NFKBIEO00221 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.97■□□□□ 0.95
NFKBIEO00221 HMGA1P7-201ENST00000406908 502 ntBASIC20.97■□□□□ 0.95
NFKBIEO00221 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 ATP5G2P4-201ENST00000442175 420 ntBASIC20.97■□□□□ 0.95
NFKBIEO00221 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.97■□□□□ 0.95
NFKBIEO00221 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.97■□□□□ 0.95
NFKBIEO00221 AL161645.1-201ENST00000622716 1255 ntBASIC20.97■□□□□ 0.95
NFKBIEO00221 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
NFKBIEO00221 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
NFKBIEO00221 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKBIEO00221 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NFKBIEO00221 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NFKBIEO00221 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKBIEO00221 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.96■□□□□ 0.95
NFKBIEO00221 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.96■□□□□ 0.95
NFKBIEO00221 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKBIEO00221 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKBIEO00221 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.96■□□□□ 0.95
NFKBIEO00221 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NFKBIEO00221 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKBIEO00221 AC116562.4-201ENST00000641316 2276 ntBASIC20.95■□□□□ 0.95
NFKBIEO00221 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NFKBIEO00221 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NFKBIEO00221 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NFKBIEO00221 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NFKBIEO00221 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKBIEO00221 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NFKBIEO00221 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKBIEO00221 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
NFKBIEO00221 AC073592.3-201ENST00000625118 1834 ntBASIC20.95■□□□□ 0.94
NFKBIEO00221 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKBIEO00221 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKBIEO00221 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.95■□□□□ 0.94
NFKBIEO00221 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NFKBIEO00221 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKBIEO00221 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.95■□□□□ 0.94
NFKBIEO00221 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms