Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC188H7C350 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC188H7C350 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC188H7C350 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC188H7C350 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC188H7C350 AC002558.1-201ENST00000488906 803 ntBASIC18.26■□□□□ 0.51
CCDC188H7C350 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC188H7C350 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC188H7C350 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC188H7C350 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC188H7C350 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC188H7C350 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC188H7C350 HMGA1P5-201ENST00000412453 271 ntBASIC18.25■□□□□ 0.51
CCDC188H7C350 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC188H7C350 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC188H7C350 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC188H7C350 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC188H7C350 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC188H7C350 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC188H7C350 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC188H7C350 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC188H7C350 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC188H7C350 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
CCDC188H7C350 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC188H7C350 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 TSPY12P-201ENST00000421279 868 ntBASIC18.24■□□□□ 0.51
CCDC188H7C350 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 TSPY20P-201ENST00000450910 630 ntBASIC18.24■□□□□ 0.51
CCDC188H7C350 AC034232.1-201ENST00000506026 1064 ntBASIC18.24■□□□□ 0.51
CCDC188H7C350 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC188H7C350 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC188H7C350 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC188H7C350 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC188H7C350 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC188H7C350 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC188H7C350 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC188H7C350 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC188H7C350 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CCDC188H7C350 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms