Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 DDX43P3-201ENST00000441064 443 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 MINOS1P3-201ENST00000457048 203 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 AC074051.2-201ENST00000565115 352 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 MIR3180-1-201ENST00000580374 94 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 AP005901.3-202ENST00000581653 237 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 MIR3180-3-201ENST00000584616 94 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 AC005336.2-201ENST00000593183 939 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 AC092329.2-201ENST00000598402 547 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 Z69720.1-201ENST00000601483 472 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 NPAP1P7-201ENST00000613027 823 ntBASIC13.18□□□□□ -0.3
KNCNA6PVL3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNCNA6PVL3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
KNCNA6PVL3 AC106820.2-201ENST00000563775 3264 ntBASIC13.17□□□□□ -0.3
KNCNA6PVL3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 DRAXINP1-201ENST00000437611 948 ntBASIC13.17□□□□□ -0.3
KNCNA6PVL3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNCNA6PVL3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.17□□□□□ -0.3
KNCNA6PVL3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNCNA6PVL3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.16□□□□□ -0.3
KNCNA6PVL3 ATP5G2P1-201ENST00000433580 426 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms