Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 AC091812.2-201ENST00000619081 385 ntBASIC21.06■□□□□ 0.96
USP17L4A6NCW7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
USP17L4A6NCW7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 TSEN15P1-201ENST00000423257 515 ntBASIC21.04■□□□□ 0.96
USP17L4A6NCW7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 CXCL1P1-201ENST00000502804 216 ntBASIC21.04■□□□□ 0.96
USP17L4A6NCW7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 AC093028.1-201ENST00000622998 982 ntBASIC21.04■□□□□ 0.96
USP17L4A6NCW7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.04■□□□□ 0.96
USP17L4A6NCW7 AL590787.1-201ENST00000568856 1315 ntBASIC21.04■□□□□ 0.96
USP17L4A6NCW7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 AL020996.1-203ENST00000536896 2307 ntBASIC21.03■□□□□ 0.96
USP17L4A6NCW7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 AL139400.1-201ENST00000366220 510 ntBASIC21.03■□□□□ 0.96
USP17L4A6NCW7 MIR770-201ENST00000390219 98 ntBASIC21.03■□□□□ 0.96
USP17L4A6NCW7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 ACTG1P4-201ENST00000425123 1122 ntBASIC21.03■□□□□ 0.96
USP17L4A6NCW7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 AC092902.6-201ENST00000641783 218 ntBASIC21.03■□□□□ 0.96
USP17L4A6NCW7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP17L4A6NCW7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP17L4A6NCW7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP17L4A6NCW7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP17L4A6NCW7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms